Insect Science
○ Wiley
Preprints posted in the last 90 days, ranked by how well they match Insect Science's content profile, based on 11 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.
Nakamura, T.; Ando, T.; Matsuoka, Y.; Niimi, T.
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CRISPR-Cas genome editing toolkits have expanded the scope of genetic studies in various emerging model organisms. However, their applications are limited mainly to knockout experiments due to technical difficulties in establishing knock-in strains, which enable in vivo molecular tagging-based experiments. Here, we investigated knock-in strategies in the harlequin ladybug Harmonia axyridis, a model insect for evolutionary developmental biology, which shows more than 200 color pattern variations within a species. We tested several knock-in strategies using synthetic DNA templates. We found that ssDNA templates generated founder knock-in strains efficiently (2.5-11%), whereas the 5 regions of ssDNA templates were frequently deleted when the insert length exceeded [~]40 bases. To overcome this limitation, we designed several 3 extended DNA templates. Fast-annealed 3-extended double-stranded DNA templates, which were designed for tagging endogenous proteins with epitope tags, showed high founder generation efficiency (9.9-20.9%) and accuracy (30.8-85.7%). This strategy is also applicable to the two-spotted cricket Gryllus bimaculatus, suggesting that the fast-annealed 3-extended dsDNA template is a versatile DNA template for generating knock-in strains in emerging model insects for developmental genetic studies. Summary statementFast-annealed 3-extended dsDNA templates facilitate efficient CRISPR-Cas9-mediated knock-in in emerging model insects.
Houda, H. B. M.; Bonhomme, R.; Renois, F.; Deschamps, M.-H.; Benoit-Biancamano, M.-O.; Meurens, F.
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The tropical house cricket Gryllodes sigillatus is a major species used in the edible insect farming industry. Despite the rapid expansion of this sector, diagnostic tools for detecting infections in these species remain limited. The lack of validated reference genes compromises the reliability of RT-qPCR-based gene expression analyses, which are essential for the development of molecular tools for disease diagnosis and health monitoring in insect production systems. To address this gap, we evaluated the expression stability of six candidate reference genes (ACTB, EF1, GAPDH, HisH3, RPL5, and 18SrRNA) across four body parts (abdomen, head, legs, and whole body) using a combination of complementary statistical approaches, including geNorm, NormFinder, BestKeeper, the {Delta}Ct method, the R statistical environment, and the integrated RefFinder tool. Candidate genes were identified and annotated using the recently published G. sigillatus genome, through sequence comparisons with closely related insect species using BLAST and reciprocal BLAST analyses, multiple sequence alignments. All procedures complied with MIQE 2.0 guidelines to ensure methodological rigor and transparency. The results showed that ACTB, EF1, RPL5, and 18SrRNA exhibited stable and consistent expression across all analyzed tissues, whereas GAPDH and HisH3 displayed high variability and were generally unsuitable for normalization, except in head tissue where GAPDH remained stable. This study provides the first validated set of reference genes for G. sigillatus, establishing a robust foundation for accurate, reproducible, and comparable gene expression analyses. Furthermore, these findings support the development of RT-qPCR-based diagnostic tools, contributing to improved health monitoring and biosafety in insect production systems.
Reese, M.; Kanost, M.; Gorman, M.
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Iron is an essential nutrient for all types of organisms, including insects and the microbes that infect them. We predicted that insects fed an iron-supplemented diet would accumulate more iron in their hemolymph, and, because infectious microbes acquire iron from their hosts, that this extra iron would increase the severity of bacterial infections. To test this hypothesis, we studied the effects of dietary iron supplementation on infection outcomes in Manduca sexta (tobacco hornworm). Larvae were fed an artificial diet, with or without antibiotics, or the same diets supplemented with 10 mM iron. Control and iron-treated larvae were inoculated with non-pathogenic Escherichia coli or the entomopathogenic Enterococcus faecalis, and bacterial load and larval survival were measured. We found that dietary iron supplementation increased the iron content of hemolymph by approximately 20 fold; however, contrary to our prediction, this increase in iron did not result in an increase in the bacterial load of either E. coli or E. faecalis. The effect of iron supplementation on survival was more complicated. As expected, for larvae inoculated with nonpathogenic E. coli, iron supplementation had no effect. For larvae inoculated with E. faecalis, the effect of iron supplementation depended on whether antibiotics were present in the diet. Without antibiotics, iron supplementation prolonged larval survival; with antibiotics, iron supplementation decreased larval survival. The results of this study do not support the hypothesis that dietary iron supplementation increases infection severity in M. sexta. Instead, the results support the viewpoint that the relationship between dietary iron and infection outcome is complex.
Kamilari, M.; Giannatos, G.; Tsiamis, G.; Augustinos, A.
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The Mediterranean fruit fly (medfly) (Ceratitis capitata (Wiedemann, 1824) is a major agricultural pest, and egg desiccation is a critical constraint during handling and mass-rearing, as even short periods without moisture may compromise developmental success and downstream adult performance. The Wolbachia-medfly symbiosis is a relatively recently established artificial association, generated less than three decades ago using Rhagoletis cerasi as the Wolbachia donor. In this study, we evaluated the effects of egg-stage desiccation on developmental success and subsequent adult performance in three medfly lines differing in Wolbachia status: the uninfected Benakeion line, the wCer2-infected 88.6 line, and the wCer4-infected S10.3 line. Eggs were exposed to desiccation for 0-24 h at 4-h intervals before transfer to larval diet, and hatching, pupation, and adult emergence were recorded. We additionally assessed adult survival under stress for flies emerging from the 0, 8, and 10 h egg-desiccation treatments. Under control conditions, Benakeion showed the highest hatching and developmental recovery, S10.3 the lowest, and 88.6 intermediate performance. Across all strains, short desiccation exposures were comparatively well tolerated, whereas prolonged exposure sharply reduced hatching, pupation, and adult emergence, with the clearest decline at 20-24 h. Strain-dependent differences were expressed mainly at the hatching stage, while later developmental transitions were more similar among strains once larvae had hatched. In the adult follow-up, strain, rather than moderate egg-stage desiccation, was the main determinant of short-term survival and survival under extreme stress, with S10.3 again showing the weakest performance. These results indicate that Wolbachia-associated fitness costs in medfly are strain dependent and that egg-stage desiccation primarily acts at the embryonic bottleneck. Beyond providing insight into the Wolbachia-medfly artificial symbiosis, our findings are directly relevant to egg-handling and strain-evaluation protocols in medfly mass-rearing systems.
Okulova, E. S.; Skrypka, D. D.; Bogomaz, O. D.; Zhidkin, R. R.; Ivanova, G. P.; Tulaeva, I. A.; Jiang, X.; Matveeva, T. V.
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BACKGROUNDThe two-spotted spider mite, Tetranychus urticae Koch, is a major agricultural pest with a rapid propensity for developing acaricide resistance. Bifenazate targets mitochondrial cytochrome b (CYTB). While the G126S mutation is frequently associated with resistance, its independent role remains unclear as it often occurs with other substitutions. This study explores the molecular basis of bifenazate resistance in a Russian laboratory strain derived from a St. Petersburg greenhouse population. RESULTSDisruptive selection with increasing bifenazate concentrations generated resistant and susceptible isofemale lines. AlphaFold2 structural modeling of CYTB indicated that G126S causes a steric clash, leading to conformational destabilization, whereas other reported mutations primarily affect the ligand-binding pocket. Oxford Nanopore sequencing revealed a very low initial frequency of the G126S allele (<1%; 226/35,895 reads) in the unselected population. After one year of stepwise selection (0.00005-0.031% a.i.), the mutant allele frequency surged to 90% (7,272/8,056 reads). No other known resistance-associated mutations were found in the analyzed cytb fragment. CONCLUSIONWe report the first identification of the G126S mutation in a Russian T. urticae population and demonstrate its rapid fixation under bifenazate selection. Within this genetic background, G126S alone appears sufficient to confer high-level resistance, emphasizing the population-specific nature of resistance evolution and the critical need for local monitoring.
Gu, X.; Tuda, M.
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Life-history traits play an important role in insect population dynamics and ecological processes. The azuki bean beetle Callosobruchus chinensis is a common pest of stored legumes and is also widely used as a model species in ecological and evolutionary research. In this study, we tested whether machine learning models could be used to estimate several traits of C. chinensis, including elytral length, development time and adult lifespan. Experimental data were obtained from laboratory populations. The dataset included biological and environmental variables such as strain, treatment condition, developmental day, sex, temperature, and CO2. Six different machine learning models were tested, including linear regression, random forest, support vector machine (SVM), neural network, gradient boosting and AdaBoost. Model performance was evaluated using cross-validation. The coefficient of determination (R2) and root mean square error (RMSE) were used to measure prediction accuracy. Prediction accuracy differed among traits. Elytral length showed relatively higher predictability than the other traits, while development time was difficult to estimate in most models. Lifespan was easier to predict than the other traits, and the neural network produced one of the highest prediction accuracies among the tested models. Feature importance analysis also showed that factors such as sex and treatment condition contributed to variation in several traits. Machine learning models therefore helped reveal relationships among biological variables and life-history traits in C. chinensis. Combining ecological experiments with machine learning analysis may help improve our understanding of insect traits and may support future studies in insect ecology and pest management.
Pakhomov, A.; Dreyer, D.; Zechmeister, T.; Mouritsen, H.; Kishkinev, D.
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Nocturnal migration is a remarkable phenomenon observed in many insect species, including moths. Migratory moths are capable of maintaining precise directional orientation during migration, as demonstrated in both laboratory and field studies, suggesting that they use multiple environmental cues for orientation and navigation. Recent studies on Australian Bogong moths revealed that these animals can use stellar cues and likely the geomagnetic field (in conjunction with local visual cues) to select and maintain population-specific migratory direction. However, the underlying orientation mechanisms used by most other migratory moths are still largely unresolved. Further, it remains unclear whether migratory moths can adjust their orientation using Earths magnetic field parameters for determining their position relative to the goal (i.e. location or map information) - an ability clearly shown in some migratory birds which respond to virtual magnetic displacements by correcting their orientation (experiments when animals are exposed to magnetic cues corresponding to other geographic locations). Here, we present results from virtual magnetic displacement experiments conducted on red underwings (Catocala nupta). In addition, we tested their orientation under simulated overcast conditions and in a vertical magnetic field to get indications whether this species relies on geomagnetic or celestial cues to maintain its population-specific migratory direction. Our results show that (1) red underwings did not compensate for virtual magnetic displacement, indicating the absence of a magnetic map; (2) they remained significantly oriented in the absence of geomagnetic information, suggesting the use of a stellar compass; and (3) there was no evidence of magnetic compass orientation in absence of any visual cues.
de Andrade Tavares, L.; Garcia, A. C.; Bell-Sakyi, L.; Fontenele de Brito, T.; Pane, A.
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Rhodnius prolixus is a primary insect vector of Trypanosoma cruzi, the causative agent of Chagas disease, a neglected parasitosis endemic in Latin American countries. It has been estimated that Chagas disease affects 7-8 million people worldwide and is responsible for approximately 1000 deaths per year. Genetic and molecular studies in this species remain challenging due to its life cycle and feeding habits, thus hindering the development of new strategies to control their populations and reduce the diffusion of Chagas disease. Recently, two stable cell lines - RPE/LULS53 and RPE/LULS57 - were derived from Rhodnius embryos, which represent promising new tools to investigate the genetics of this insect vector. Here, we describe their gene expression landscapes through transcriptomic approaches. We show that 8,968 expressed genes are shared between the two cell lines, whereas 391 and 1,088 genes are uniquely expressed in RPE/LULS53 and RPE/LULS57, respectively. Although key components of primary developmental, immune and redox signaling pathways are expressed in both cell lines, some genes such as Frizzled-10-a-like and catalase show marked differences in expression. Our results strongly suggest that RPE/LULS53 and RPE/LULS57 likely represent two different cell phenotypes. Consistent with this, gene ontology analysis reveals that RPE/LULS53 is enriched for animal organ morphogenesis and stress response, while RPE/LULS57 for DNA-directed RNA polymerase activity, among others. Despite these differences, both cell lines express comparable levels of transcripts from resident transposable elements, including the highly abundant Mariner and LINE/I elements, as well as horizontally transferred transposons. Our findings shed light on the nature of the RPE/LULS53 and RPE/LULS57 embryo-derived cell lines and provide valuable transcriptomic resources for future genetic and functional studies in Rhodnius and other triatomine insect vectors. Author summaryRhodnius prolixus is a blood-feeding insect and a major vector of Chagas disease, a parasitosis endemic in Latin America and affecting millions of people worldwide. In the absence of effective drugs and vaccines, the control of the insect population represents a promising strategy to reduce the diffusion of the disease. Yet, genetic and functional studies in Rhodnius are extremely challenging due to its feeding habit and life cycle. To overcome these limitations, researchers have previously developed two stable cell lines derived from Rhodnius embryos. In this study, we provide the first characterization of the genes expressed in these cell lines. We found that, while the two cell lines share many expressed genes, each of them also has distinct gene expression patterns pointing to two different cell types with specialized functions. These differences likely affect the way they respond to stress and regulate biological processes. Our findings provide an important resource for researchers studying Rhodnius prolixus and other insect vectors, helping advance our understanding of the genetic and molecular mechanisms that control the insect development and mediate the interactions between insect vectors and the parasites they transmit
Coverley, A. J.; Sheldon, K. S.; Marshall, K. E.
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O_LIEctotherms in thermally variable environments mediate energy expenditure through both physiological and behavioural responses. However, many studies focus on constant temperature acclimation, and few consider behaviour and physiology in unison. It is unclear how acclimation to thermal variability affects locomotory choices, activity timing, and performance across daily thermal cycles. C_LIO_LIWe investigated the effects of thermal variability in the temperate dung beetle Onthophagus taurus. Following acclimation to a low amplitude (22{degrees}C {+/-} 2{degrees}C) or a high amplitude (22{degrees}C {+/-} 10{degrees}C) temperature regime, we measured behaviour and metabolic rate across temperatures. We hypothesised that O. taurus adjusts its locomotive strategy and search window when kept in high amplitude fluctuating temperatures to reduce energy loss associated with high temperature exposure. C_LIO_LIWe found that differences in energy expenditure were determined by propensity for flight which differed between acclimation treatments, particularly at intermediate temperatures. We also found that, following acclimation to a high amplitude of thermal variability, O. taurus exhibited a greater intensity of activity over a narrower window of time, and O. taurus acclimated to a low amplitude of thermal variability showed nocturnal activity. C_LIO_LIWe then used the data to model activity through the growing season over five years. Biophysical models were built using NicheMapR Microclimate and Ectotherm functions to test the length of potential searching time across seasons, the temperatures individuals are exposed, and locomotive strategy. Model outputs showed that acclimation to higher amplitudes of thermal variability increased accumulated degree-hours of activity relative to the low variability acclimation group. Individuals acclimated to higher amplitudes of thermal variability showed greater accumulated degree-hours in spring and fall, but exhibited shorter periods of activity during summer, with the model predicting increased opportunities for flight. Comparatively, O. taurus from the low variability acclimation treatment showed increased night activity in summer but did not fly. C_LI
Rismayani, R.; Sai, K.; Ohsako, T.; Murata, K.; Arai, Y.; Takeda, N.; Yamamoto, M.; Umemiya-Shirafuji, R.; Suzuki, T.
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Adult females of the two-spotted spider mite, Tetranychus urticae Koch, enter a photoperiodically induced diapause to overwinter. Diapause in T. urticae is accompanied by reproductive arrest and the orange body coloration that arises from the accumulation of astaxanthin esters. How these two traits are coordinated at the molecular level remains poorly understood. Here, we compared the proteomes of adult females reared under diapause-inducing (long-night) and non-diapause-inducing (short-night) photoperiods using liquid chromatography-tandem mass spectrometry, followed by RNA interference (RNAi) of candidate genes. The carotenoid biosynthesis enzymes phytoene desaturase (TuPDS) and lycopene cyclase/phytoene synthase (TuLCPS), both encoded by genes horizontally transferred from fungi, were more abundant in diapausing females than in non-diapausing females. RNAi of the genes encoding TuPDS and TuLCPS markedly reduced orange pigmentation as well as {beta}-carotene and astaxanthin contents, demonstrating that these enzymes are required for diapause-associated pigmentation. Our proteomic analysis further identified a single PLAT (Polycystin-1, Lipoxygenase, Alpha-toxin) domain protein, TuPLAT10, as one of the most strongly upregulated proteins in diapausing females. The PLAT domain is a lipid-binding module, suggesting a role for TuPLAT10 in lipid metabolism. In addition to the suppression of orange pigmentation, RNAi of the TuPLAT10 gene restored reproduction even under diapause-inducing conditions and selectively reduced TuPDS and TuLCPS protein levels, despite the absence of sequence similarity to their genes. We propose that TuPLAT10 acts as a lipid-allocation switch that, in response to photoperiodic information, partitions fatty acids between astaxanthin esterification and yolk lipid supply, thereby coupling reproductive arrest and carotenoid pigmentation during diapause in T. urticae.
Arora, B.; Rai, S.; Gupta, P.; Dey, J.; Holeyachi, B. S.; Mondol, S.
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Markhor (Capra falconeri) is a charismatic, threatened, large, high-altitude bovid found in parts of central and south Asia. The species faces threats such as habitat loss, hunting, poaching, livestock competition, hybridisation, and disease, yet research on wild populations is challenging. Various biological aspects, including surveys, diet, population dynamics, interactions with livestock, hybridisation, and disease, have been studied locally, along with behavior and reproductive biology, but details such as pregnancy, oestrus, and parturition timing remain unestablished. We conducted the first systematic, detailed, and fine-scale characterization of the reproductive steroid profiles of two males and five female markhors (Capra falconeri heptneri) in a captive population at the Padmaja Naidu Himalayan Zoological Park (PNHZP), West Bengal, India. We collected weekly fecal samples, standardized and validated measurements of progesterone (fP4M) and testosterone (fTM) metabolites, and conducted reproductive profiling to assess reproductive stages in both sexes. Analyses of annual fP4M and fTM data from male and female markhor individuals showed similar profiles and synchronicity, with individual variation, and peaks and baselines were evident for both hormones. In both sexes, significantly higher hormone titres were observed during the sexually active and inactive phases. Non-invasive measurement of reproductive hormones accurately reflected ovarian function in females, helping establish mating, gestation, and parturition timelines in female markhors and determine the breeding season in males. These approaches support husbandry and breeding management by identifying optimal pairing, diagnosing pregnancy, and predicting parturition in both captive and wild populations. When applied correctly, these tools could greatly aid population monitoring of other endangered species across high-altitude regions worldwide.
Serrano-Rojas, S. J.; Pasukonis, A.; Gonzalez, M.; Rodriguez, C.; Calvo Usto, R. F.; Carazas, A.; Sandoval Garcia, C.; Zolorzano, J. P.; Arcila-Perez, L. F.; Boluarte-Salinas, S.; Baldarrago, E.; Sosa-Salazar, A.; O'Connell, L. A.
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Seasonal rainfall shapes biological responses in tropical ecosystems, yet how tropical organisms integrate behavioral and physiological responses to cope with seasonality remains poorly understood. We assessed how four poison frog species with contrasting reproductive strategies respond to dry and wet season environmental conditions. We quantified spatial behavior, microhabitat use, hormone concentrations, and chemical defenses in two seasonal breeders (Allobates femoralis and Ameerega trivittata) and two year-round breeders (Ameerega macero and Ameerega shihuemoy). Seasonal breeders exhibited pronounced sex-specific shifts in space use, where males expanded their space use during the wet season, likely to track reproductive opportunities, while A. femoralis females increased their spatial use during the dry season, likely responding to foraging demands when prey resources are sparse. Year-round breeders maintained similar space use across seasons, likely reflecting their ability to access key resources within the same space to reproduce year-round. Microhabitat use was flexible, as seasonal breeders shifted toward humid refugia during the dry season and reproduction-associated microhabitats during the wet season, whereas year-round breeders selected microhabitats that facilitate continuous reproduction across seasons. Despite these behavioral responses, corticosterone, testosterone, and chemical defenses showed no consistent seasonal variation, suggesting that behavioral flexibility is decoupled from seasonal variation in these measured physiological responses. Our study suggests that poison frogs are able to buffer environmental fluctuations through behavioral flexibility. However, given the increasing unpredictability in rainfall timing and intensity as a result of climate change, how these coping strategies will function in the long term is uncertain.
de Carvalho, R. G. G.; de Fraga, C. N.; Moura, M. R.; Giacomin, L. L.
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Background and aimsThis study combines morphological and environmental data to better understand a Brunfelsia (Solanaceae) species complex, aiming to clarify patterns of variation and identify ecological factors that shape morphotype boundaries. Such an approach provides a broader perspective on how organisms respond to environmental gradients and contributes to a more comprehensive understanding of biodiversity. MethodsWe analyzed 273 herbarium specimens for 13 morphological traits using univariate and ordination analyses, namely PCA and CVA. Climatic and edaphic variables were extracted for 147 specimens with georeferenced records. To assess habitat suitability and the ecological niche of each predefined morphotype, niche models under present conditions and niche overlap tests were conducted. A redundancy analysis (RDA) was applied to evaluate how environmental predictors explain variation in vegetative and floral traits. Finally, DAPC was used to estimate membership probabilities based on morphological and environmental data. Key ResultsTwo well-differentiated groups were recovered: the capitata-hydrangeiformis morphotype, allegedly composing a cline, and the ecologically and morphologically distinct "bahia" morphotype. Variation in floral traits was better explained by environmental predictors than variation in vegetative traits; moreover, floral traits were able to delineate morphotypes more robustly when plotted in isolation. However, when analyzing the results of ecological niche overlap, a significant ecological separation of the "bahia" morphotype from the others was observed. Therefore, key morphological characters for the taxonomy of Brunfelsia covary in part with environmental variables. ConclusionsThese findings support the recognition of "bahia" morphotype as a distinct species to be formally described. This integrative approach contributes to understanding diversification processes in biodiversity hotspots and highlights hidden taxonomic diversity within Brunfelsia, where many rare and narrow-endemic taxa lie.
Bajgar, A.; Krejcova, G.; Smykal, V.; Dolezel, D.
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Seasonal variation in day length provides a reliable cue that allows insects to anticipate upcoming environmental challenges. Here, we demonstrate that photoperiod induces pronounced, sex-specific immune priming in the linden bug Pyrrhocoris apterus. Females exposed to short-day, diapause-inducing conditions exhibited broadly enhanced immune activity compared with long-day females, whereas immune parameters in males were largely unaffected by photoperiod. Short-day females showed increased immune cell abundance, elevated expression of immune-related genes, enhanced humoral immune activity, and increased resistance to bacterial infection. Importantly, photoperiod-induced immune priming depended on a functional m-cryptochrome gene, linking seasonal immune regulation to the photoperiodic timer. Consistent with laboratory results, females collected under natural short-day conditions also displayed enhanced immune parameters despite increased environmental variability. Together, our findings identify photoperiod as a key regulator of immune preparedness in female insects and reveal a sex-specific anticipatory immune strategy associated with seasonal timing.
Larsson Aberg, V.; Boman, J.; Backstrom, N.; Lind, M. I.
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The connection between female host plant preference and offspring performance is important for understanding how relationships between plants and phytophagous insects have evolved. According to the preference-performance hypothesis, female insects should evolve to oviposit on host plants on which offspring performance is the highest. Here, we examined the preference-performance hypothesis in the northern brown argus (Aricia artaxerxes) butterfly in the province of Uppland, Sweden, by comparing female host plant preference and larval growth between the host plant species wood cranesbill (Geranium sylvaticum) and bloody cranesbill (G. sanguineum). We also investigated if host plant preference in A. artaxerxes was related to the geographic distribution of A. artaxerxes and its host plants in the province Uppland. We found that the A. artaxerxes females, contrary to the preference-performance hypothesis, preferred ovipositing on G. sylvaticum, even though larvae feeding on G. sylvaticum were slightly smaller than those feeding on G. sanguineum. Since G. sylvaticum is more abundant and probably more utilized than G. sanguineum in Uppland, an explanation for this negative preference-performance connection may be that there are advantages associated with utilizing a more common host plant species, even though larvae feeding on this plant show reduced growth rates. Overall, the results show that factors other than offspring performance, such as geographic distribution, may influence female host plant preference in A. artaxerxes.
Piovesan, A.; Praz, C.; Voelkl, B.; Lanz, S.; Neumann, P.; Beaureapaire, A.
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Pollinator populations are facing worldwide declines, underscoring conservation needs. Yet, conservation assessments still mostly rely on occurrence data, often derived from heterogeneous and opportunistic observations. While such data can inform on species presence and distribution, they may overlook important markers of population declines. This is particularly problematic for social species such as bumble bees, which typically exhibit low effective population sizes despite high abundance of workers observed in the field. Despite these putative pitfalls, the relationship between occurrence-based and genetic-based estimates remains largely unexplored in social bees. We here investigated spatio-temporal genetic patterns in five Swiss Bombus species representing contrasting population trajectories over the last century: B. humilis and B. sylvarum (stable), B. ruderatus (increasing), B. pomorum (regionally extinct), and B. veteranus (declining). Museum specimens collected between 1929 and 2023 were genotyped at 11 microsatellite loci to compare spatio-temporal fluctuations in genetic diversity and population structure with occurrence data. Overall, multilocus heterozygosity and allelic richness remained stable in all species during the time period investigated, indicating that the diverging population trends did not result in substantial variation of genetic diversity. In contrast, strong and significant shifts in allelic frequencies between time periods were detected in three species, suggesting recent immigration events. Isolation by distance was detected in the cold-adapted B. veteranus, while the extant warm-adapted species (B. humilis, B. sylvarum, B. ruderatus) showed high levels of gene flow between locations. In B. pomorum, increasing genetic homogenization was observed before extinction. Altogether, these findings show that genetic diversity indexes are not the most adapted tools to monitor conservation status of social bee populations, and that estimates of population structure such as allelic shifts may be more informative. Moreover, these results highlight the importance of monitoring metapopulation dynamics and ensuring connectivity among populations to facilitate gene flow and enable demographic rescue processes.
Toga, K.; Yokoi, K.; Bono, H.
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Eusociality in bees represents a major evolutionary transition and understanding its molecular basis is fundamental for sociogenomic studies. Comparative genomics has revealed correlations between transcription factor binding site (TFBS) abundance and social complexity; however, when and where these TFBSs function in a eusocial context remains largely unclear. In this study, we performed cap analysis of gene expression (CAGE) during worker metamorphosis in the honeybee Apis mellifera to identify TFBSs within active enhancers and decipher the regulatory relationships between these enhancers and their target genes. We identified 17,349 transcription start sites (TSSs) and 842 candidate enhancers. Using CAGE, we identified five clusters based on expression patterns. Notably, genes associated with the canonical metamorphic regulators, Broad complex (Br-c) and E93, were found within specific clusters. By integrating the correlations between enhancer and TSS activities with motif enrichment analysis, we identified 15 transcription factor-enhancer-TSS regulatory relationships. Among these, tramtrack (ttk)-binding sites were identified in five enhancers associated with four target genes, including Br-c. The number of target genes regulated by ttk was the highest in our dataset. To examine whether this regulatory relationship is conserved across bee species with varying levels of sociality, we analyzed the sequence conservation of ttk-binding sites in Br-c enhancers and found that perfect sequence conservation of ttk-binding site was restricted to the Apis genus. The ttk-binding sites of other target genes exhibited the same Apis-specific conservation pattern. Our findings suggest that gene regulatory relationships during worker metamorphosis occur in a lineage-specific manner in the Apis genus. SignificanceHoneybees produce distinct castes--queens and workers--from genetically identical larvae via differences in gene regulation. Although enhancers have been computationally predicted, their actual activity during bee development has rarely been measured directly, and the CAGE technology has never been applied for this purpose. We identified active enhancers during worker metamorphosis and discovered that the transcription factor ttk may regulate Br-c, a key developmental gene. This study provides the first direct evidence of active enhancers and their regulatory roles in honeybee worker metamorphosis.
Jang, S.; Shimoda, M.
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The mass-rearing of black soldier fly (Hermetia illucens) larvae (BSFL) is a promising solution for converting organic waste into high-quality insect protein, but preventing larval escape from open-top rearing containers remains a major management challenge. Conventional escape-control methods are often unreliable or impractical. To address this, we developed and evaluated a novel physical barrier, the anti-climbing tape, featuring regularly arranged macroscale protrusions designed to disrupt larval locomotion on vertical surfaces. We conducted a series of experiments to examine the design parameters of the anti-climbing tapes, including the gap size between protrusions and the number of protrusion rows. Our results demonstrate that the anti-climbing tape prevents escape via a dual mechanism: (1) physical obstruction, in which gaps narrower than the larval body width block larvae from passing through, and (2) adhesion reduction, in which the elevated protrusion array decreases the effective contact area for wet adhesion while increasing gravitational torque acting on the larval body. The effectiveness of these mechanisms was dependent on larval size. A design featuring 0.5-mm gaps and a 15-row protrusion array completely prevented the escape of later-instar larvae (>10 mm) in a 20-day large-scale trial, whereas the method was less effective for smaller larvae. In conclusion, the anti-climbing tape provides a robust and chemical-free approach to BSFL escape in mass rearing. To ensure reliable performance, its design parameters, both gap size and array width must be optimised to suppress the mechanical and adhesive components of larval climbing according to the target larval size. Conflict of interestS. Jang and M. Shimoda are inventors on a Japanese patent application (No. 2022-172252, filed November 27, 2022) related to the method described in this manuscript. FundingThis study was supported by Korea-Japan Joint Government Scholarship Program for the Students in Science and Engineering Departments, the Korean Scholarship Foundation, and the University of Tokyo Foundations Support Fund for International Students.
Rattigan, S. D.; Beaupere, L. C.; Sheldon, B. C.; Learmonth, R.
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O_LIPhenological shifts are a major ecological consequence of climate change, yet studies often focus on single life stages meaning that the potential for carryover effects between life stages remains poorly understood. Failing to account for these effects may lead to inaccurate estimates of phenological shifts, with consequences for predicted synchrony among interacting species. This is especially relevant for temperate systems where climate warming is occurring unevenly across the year. C_LIO_LIHere, we investigated how temperature experienced the previous autumn and winter (during the pupal and egg stage) influences spring phenology in the winter moth (Operophtera brumata), a herbivorous insect with distinct life stages. Using 50 years of local climate data to create five experimental temperature regimes, we first quantified phenotypic plasticity in the duration and temporal variability of pupal and egg development. We then examined how timing of adult moth emergence affects timing of offspring hatching. C_LIO_LIWe found divergent effects of temperature on different life stages; pupal development time was shortest at intermediate temperatures while egg development time decreased linearly with increasing temperature. Furthermore, phenological shifts due to the conditions experienced by the mother were carried over to influence the phenology of her offspring. While this carryover effect was partially compensated during subsequent stages, compensation decreased under warming conditions. C_LIO_LIThese results refine our understanding of the sensitivity of the annual cycle of winter moth phenology to variation in temperature with potential implications for population dynamics and interspecific interactions. Overall, our findings highlight the need to consider the impacts of warming across multiple life stages so that carryover effects can be properly accounted for. Doing so will improve predictions of phenological shifts under future climates. C_LI
Mwatawala, M. W.; Ruboha, J. O.; Bakengesa, J.; Zinga, M. K.; De Meyer, M.
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Understanding how fruit fly species partition resources along environmental gradients is important for predicting pest pressure under changing climatic conditions. The population ecology of Dacus bivittatus (Bigot) and Dacus punctatifrons (Karsch) (Diptera: Tephritidae) was examined across six sites spanning 526-1,650 m above sea level in the Uluguru Mountains, Tanzania, over eight years (2004-2012). A total of 2,200 weekly trap records were aggregated into 292 site-month observations and standardised as flies per trap per day (FTD). Dacus bivittatus showed strong seasonal structuring (H = 43.03, p < 0.001), with abundance peaking during the cool dry season (June-August), whereas D. punctatifrons showed no clear seasonal pattern. Both species declined significantly with increasing altitude ({rho} = -0.308 and -0.769, respectively; p < 0.001), but the decline was steeper for D. punctatifrons. Species dominance shifted along the gradient: D. punctatifrons dominated warm lowland conditions (>24 {degrees}C), whereas D. bivittatus prevailed at elevations above approximately 569 m. Seasonal niche overlap declined markedly with altitude, indicating increasing temporal segregation between the species in cooler environments. These findings demonstrate that altitude structures ecological divergence between two closely related fruit fly pests and provide a basis for site-specific monitoring and climate-sensitive pest forecasting in tropical mountain agroecosystems.